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A new portal for the analysis of human splicing variants
(LANDES BIOSCIENCEAUSTIN, 2012)
Understanding alternative splicing is crucial to elucidate the mechanisms behind several biological phenomena, including diseases. The huge amount of expressed sequences available nowadays represents an opportunity and a ...
Global transcriptome analysis reveals circadian control of splicing events in Arabidopsis thaliana
(Wiley Blackwell Publishing, Inc, 2020-05)
The circadian clock of Arabidopsis thaliana controls many physiological and molecular processes, allowing plants to anticipate daily changes in their environment. However, developing a detailed understanding of how ...
Alternative splicing switches: Important players in cell differentiation
(John Wiley & Sons Inc, 2017-06-27)
Alternative splicing (AS) greatly expands the coding capacities of genomes by allowing the generation of multiple mature mRNAs from a limited number of genes. Although the massive switch in AS profiles that often accompanies ...
Splicing regulation by long noncoding RNAs
(Oxford University Press, 2018-02)
Massive high-throughput sequencing techniques allowed the identification of thousands of noncoding RNAs (ncRNAs) and a plethora of different mRNA processing events occurring in higher organisms. Long ncRNAs can act directly ...
LATENT RANK CHANGE DETECTION FOR ANALYSIS OF SPLICE-JUNCTION MICROARRAYS WITH NONLINEAR EFFECTS
(INST MATHEMATICAL STATISTICS, 2011)
Alternative splicing of gene transcripts greatly expands the functional capacity of the genome, and certain splice isoforms may indicate specific disease states such as cancer. Splice junction microarrays interrogate ...
The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators
(Oxford University Press, 2016-10-17)
Alternative splicing (AS) is a key component of gene expression programs that drive cellular differentiation. Smooth muscle cells (SMCs) are important in the function of a number of physiological systems; however, investigation ...
ASpli: integrative analysis of splicing landscapes through RNA-Seq assays
(Oxford University Press, 2021-03)
Genome-wide analysis of alternative splicing has been a very active field of research since the early days of Next Generation Sequencing technologies. Since then, ever-growing data availability and the development of ...
The carboxy terminal domain of RNA polymerase II and alternative splicing
(Cell Press, 2010-09)
Alternative splicing is controlled by cis-regulatory sequences present in the pre-mRNA and their cognate trans-acting factors, as well as by its coupling to RNA polymerase II (pol II) transcription. A unique feature of ...